Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SCG2P13521 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.6■□□□□ 0.89
SCG2P13521 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 VENTXP7-201ENST00000475503 772 ntBASIC20.6■□□□□ 0.89
SCG2P13521 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.6■□□□□ 0.89
SCG2P13521 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.6■□□□□ 0.89
SCG2P13521 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.6■□□□□ 0.89
SCG2P13521 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.6■□□□□ 0.89
SCG2P13521 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.6■□□□□ 0.89
SCG2P13521 AC116407.2-201ENST00000613639 860 ntBASIC20.6■□□□□ 0.89
SCG2P13521 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SCG2P13521 AC068880.1-201ENST00000507289 2297 ntBASIC20.6■□□□□ 0.89
SCG2P13521 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SCG2P13521 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 AC006116.8-202ENST00000587620 1550 ntBASIC20.59■□□□□ 0.89
SCG2P13521 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.59■□□□□ 0.89
SCG2P13521 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SCG2P13521 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
SCG2P13521 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.59■□□□□ 0.89
SCG2P13521 CLEC4GP1-201ENST00000596555 870 ntBASIC20.59■□□□□ 0.89
SCG2P13521 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.59■□□□□ 0.89
SCG2P13521 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCG2P13521 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 AC012317.2-201ENST00000623305 2251 ntBASIC20.58■□□□□ 0.89
SCG2P13521 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.58■□□□□ 0.89
SCG2P13521 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SCG2P13521 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
SCG2P13521 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.58■□□□□ 0.89
SCG2P13521 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG2P13521 AC096633.1-201ENST00000422446 749 ntBASIC20.58■□□□□ 0.89
SCG2P13521 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SCG2P13521 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.58■□□□□ 0.89
SCG2P13521 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.58■□□□□ 0.89
SCG2P13521 Z69720.1-201ENST00000601483 472 ntBASIC20.58■□□□□ 0.89
SCG2P13521 AL138831.2-201ENST00000606564 490 ntBASIC20.58■□□□□ 0.89
SCG2P13521 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
SCG2P13521 AC125634.1-201ENST00000438758 1403 ntBASIC20.58■□□□□ 0.88
SCG2P13521 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCG2P13521 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.58■□□□□ 0.88
SCG2P13521 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCG2P13521 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
SCG2P13521 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.58■□□□□ 0.88
SCG2P13521 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCG2P13521 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SCG2P13521 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SCG2P13521 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.57■□□□□ 0.88
SCG2P13521 AL450487.1-201ENST00000426799 995 ntBASIC20.57■□□□□ 0.88
SCG2P13521 KRT17P6-201ENST00000453795 1220 ntBASIC20.57■□□□□ 0.88
SCG2P13521 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.57■□□□□ 0.88
SCG2P13521 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.57■□□□□ 0.88
SCG2P13521 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCG2P13521 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms