Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 AL590627.1-203ENST00000421194 1026 ntBASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 FGFR3P6-201ENST00000457012 610 ntBASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 SCARNA2-201ENST00000458748 420 ntBASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 AC093909.1-201ENST00000504731 1122 ntBASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40ALP0C0E4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AL031284.1-201ENST00000419297 478 ntBASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 MTDHP3-201ENST00000594186 672 ntBASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AC090164.3-201ENST00000610780 2143 ntBASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AC120114.3-201ENST00000611923 658 ntBASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40ALP0C0E4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 AC104581.1-202ENST00000635932 2618 ntBASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 AC073648.2-201ENST00000510116 352 ntBASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RAB40ALP0C0E4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms