Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HOXC6P09630 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.14■□□□□ 0.81
HOXC6P09630 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC6P09630 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.14■□□□□ 0.81
HOXC6P09630 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HOXC6P09630 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.14■□□□□ 0.81
HOXC6P09630 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC6P09630 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.14■□□□□ 0.81
HOXC6P09630 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.14■□□□□ 0.81
HOXC6P09630 AC073592.5-201ENST00000624854 528 ntBASIC20.14■□□□□ 0.81
HOXC6P09630 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.14■□□□□ 0.81
HOXC6P09630 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC6P09630 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HOXC6P09630 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.14■□□□□ 0.81
HOXC6P09630 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HOXC6P09630 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.13■□□□□ 0.81
HOXC6P09630 AL353593.2-201ENST00000602529 1483 ntBASIC20.13■□□□□ 0.81
HOXC6P09630 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.13■□□□□ 0.81
HOXC6P09630 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.13■□□□□ 0.81
HOXC6P09630 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.13■□□□□ 0.81
HOXC6P09630 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.13■□□□□ 0.81
HOXC6P09630 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
HOXC6P09630 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HOXC6P09630 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HOXC6P09630 AL031598.1-201ENST00000561511 1773 ntBASIC20.13■□□□□ 0.81
HOXC6P09630 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
HOXC6P09630 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HOXC6P09630 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HOXC6P09630 ESPNP-201ENST00000270691 2015 ntBASIC20.12■□□□□ 0.81
HOXC6P09630 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 KRT18P28-201ENST00000453838 1332 ntBASIC20.12■□□□□ 0.81
HOXC6P09630 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.12■□□□□ 0.81
HOXC6P09630 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 AL020989.1-201ENST00000422979 469 ntBASIC20.12■□□□□ 0.81
HOXC6P09630 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.12■□□□□ 0.81
HOXC6P09630 DUTP2-201ENST00000519164 463 ntBASIC20.12■□□□□ 0.81
HOXC6P09630 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.12■□□□□ 0.81
HOXC6P09630 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.12■□□□□ 0.81
HOXC6P09630 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.12■□□□□ 0.81
HOXC6P09630 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HOXC6P09630 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HOXC6P09630 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HOXC6P09630 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.12■□□□□ 0.81
HOXC6P09630 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HOXC6P09630 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.11■□□□□ 0.81
HOXC6P09630 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.11■□□□□ 0.81
HOXC6P09630 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.11■□□□□ 0.81
HOXC6P09630 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
HOXC6P09630 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.11■□□□□ 0.81
HOXC6P09630 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
HOXC6P09630 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
HOXC6P09630 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.11■□□□□ 0.81
HOXC6P09630 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.11■□□□□ 0.81
HOXC6P09630 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HOXC6P09630 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HOXC6P09630 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HOXC6P09630 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HOXC6P09630 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 AC093010.1-201ENST00000473625 1624 ntBASIC20.1■□□□□ 0.81
HOXC6P09630 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HOXC6P09630 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HOXC6P09630 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HOXC6P09630 ELK2BP-201ENST00000415014 1224 ntBASIC20.1■□□□□ 0.81
HOXC6P09630 AC254562.1-201ENST00000417586 456 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms