Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.03■□□□□ 0.48
VIMP08670 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.03■□□□□ 0.48
VIMP08670 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.03■□□□□ 0.48
VIMP08670 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.03■□□□□ 0.48
VIMP08670 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.03■□□□□ 0.48
VIMP08670 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
VIMP08670 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.03■□□□□ 0.48
VIMP08670 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.03■□□□□ 0.48
VIMP08670 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
VIMP08670 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VIMP08670 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.03■□□□□ 0.48
VIMP08670 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
VIMP08670 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
VIMP08670 NBPF21P-201ENST00000425093 1451 ntBASIC18.02■□□□□ 0.48
VIMP08670 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.02■□□□□ 0.48
VIMP08670 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.02■□□□□ 0.48
VIMP08670 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.02■□□□□ 0.48
VIMP08670 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.02■□□□□ 0.48
VIMP08670 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.02■□□□□ 0.48
VIMP08670 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.02■□□□□ 0.48
VIMP08670 AC008687.6-201ENST00000596318 630 ntBASIC18.02■□□□□ 0.48
VIMP08670 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.02■□□□□ 0.48
VIMP08670 AC080038.1-201ENST00000611274 1154 ntBASIC18.02■□□□□ 0.48
VIMP08670 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.02■□□□□ 0.48
VIMP08670 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VIMP08670 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VIMP08670 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VIMP08670 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.02■□□□□ 0.47
VIMP08670 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VIMP08670 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VIMP08670 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VIMP08670 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
VIMP08670 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.01■□□□□ 0.47
VIMP08670 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.01■□□□□ 0.47
VIMP08670 PRKY-204ENST00000533551 1019 ntBASIC18.01■□□□□ 0.47
VIMP08670 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.01■□□□□ 0.47
VIMP08670 SOX15-203ENST00000570788 1093 ntBASIC18.01■□□□□ 0.47
VIMP08670 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.01■□□□□ 0.47
VIMP08670 AC004264.1-201ENST00000608354 794 ntBASIC18.01■□□□□ 0.47
VIMP08670 AC092118.2-201ENST00000613495 667 ntBASIC18.01■□□□□ 0.47
VIMP08670 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.01■□□□□ 0.47
VIMP08670 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VIMP08670 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VIMP08670 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VIMP08670 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
VIMP08670 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18■□□□□ 0.47
VIMP08670 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VIMP08670 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18■□□□□ 0.47
VIMP08670 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
VIMP08670 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18■□□□□ 0.47
VIMP08670 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms