Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.86■□□□□ 0.61
RB1P06400 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.86■□□□□ 0.61
RB1P06400 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.86■□□□□ 0.61
RB1P06400 AC018845.2-201ENST00000568326 409 ntBASIC18.86■□□□□ 0.61
RB1P06400 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RB1P06400 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RB1P06400 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RB1P06400 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RB1P06400 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RB1P06400 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RB1P06400 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
RB1P06400 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.85■□□□□ 0.61
RB1P06400 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.85■□□□□ 0.61
RB1P06400 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RB1P06400 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.85■□□□□ 0.61
RB1P06400 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RB1P06400 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.85■□□□□ 0.61
RB1P06400 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.85■□□□□ 0.61
RB1P06400 SIGLEC30P-201ENST00000455569 941 ntBASIC18.85■□□□□ 0.61
RB1P06400 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 AC004790.2-201ENST00000623588 572 ntBASIC18.85■□□□□ 0.61
RB1P06400 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.85■□□□□ 0.61
RB1P06400 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.85■□□□□ 0.61
RB1P06400 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.85■□□□□ 0.61
RB1P06400 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RB1P06400 GPR89P-201ENST00000407924 1495 ntBASIC18.84■□□□□ 0.61
RB1P06400 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RB1P06400 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.84■□□□□ 0.61
RB1P06400 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
RB1P06400 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RB1P06400 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RB1P06400 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.84■□□□□ 0.61
RB1P06400 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.84■□□□□ 0.61
RB1P06400 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.84■□□□□ 0.61
RB1P06400 FAM8A3P-201ENST00000427218 844 ntBASIC18.84■□□□□ 0.61
RB1P06400 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.84■□□□□ 0.61
RB1P06400 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RB1P06400 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.84■□□□□ 0.61
RB1P06400 DUTP2-201ENST00000519164 463 ntBASIC18.84■□□□□ 0.61
RB1P06400 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.84■□□□□ 0.61
RB1P06400 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.84■□□□□ 0.61
RB1P06400 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.84■□□□□ 0.61
RB1P06400 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RB1P06400 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.84■□□□□ 0.61
RB1P06400 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.84■□□□□ 0.61
RB1P06400 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RB1P06400 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RB1P06400 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RB1P06400 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RB1P06400 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RB1P06400 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RB1P06400 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RB1P06400 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.83■□□□□ 0.61
RB1P06400 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RB1P06400 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.83■□□□□ 0.6
RB1P06400 ACTG1P14-201ENST00000446382 1122 ntBASIC18.83■□□□□ 0.6
RB1P06400 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.83■□□□□ 0.6
RB1P06400 AL078644.1-201ENST00000609881 752 ntBASIC18.83■□□□□ 0.6
RB1P06400 AC010654.1-201ENST00000615722 808 ntBASIC18.83■□□□□ 0.6
RB1P06400 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.83■□□□□ 0.6
RB1P06400 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RB1P06400 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RB1P06400 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.83■□□□□ 0.6
RB1P06400 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.82■□□□□ 0.6
RB1P06400 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RB1P06400 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.82■□□□□ 0.6
RB1P06400 AL049757.1-201ENST00000616842 1596 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms