Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.4■■□□□ 1.34
COL5A2P05997 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL5A2P05997 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
COL5A2P05997 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.4■■□□□ 1.34
COL5A2P05997 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL5A2P05997 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.39■■□□□ 1.34
COL5A2P05997 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.34
COL5A2P05997 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.39■■□□□ 1.34
COL5A2P05997 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL5A2P05997 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.39■■□□□ 1.34
COL5A2P05997 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.39■■□□□ 1.34
COL5A2P05997 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC23.39■■□□□ 1.34
COL5A2P05997 AC074386.1-202ENST00000463561 864 ntBASIC23.39■■□□□ 1.34
COL5A2P05997 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC23.39■■□□□ 1.34
COL5A2P05997 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL5A2P05997 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC23.39■■□□□ 1.34
COL5A2P05997 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL5A2P05997 AC022145.2-201ENST00000598203 171 ntBASIC23.39■■□□□ 1.34
COL5A2P05997 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC23.39■■□□□ 1.34
COL5A2P05997 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
COL5A2P05997 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL5A2P05997 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.39■■□□□ 1.33
COL5A2P05997 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
COL5A2P05997 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL5A2P05997 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL5A2P05997 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL5A2P05997 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.39■■□□□ 1.33
COL5A2P05997 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.38■■□□□ 1.33
COL5A2P05997 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23.38■■□□□ 1.33
COL5A2P05997 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC23.38■■□□□ 1.33
COL5A2P05997 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.38■■□□□ 1.33
COL5A2P05997 AC109322.1-201ENST00000524499 1264 ntBASIC23.38■■□□□ 1.33
COL5A2P05997 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.38■■□□□ 1.33
COL5A2P05997 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.38■■□□□ 1.33
COL5A2P05997 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.38■■□□□ 1.33
COL5A2P05997 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.38■■□□□ 1.33
COL5A2P05997 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
COL5A2P05997 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
COL5A2P05997 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
COL5A2P05997 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.38■■□□□ 1.33
COL5A2P05997 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL5A2P05997 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL5A2P05997 AC023141.5-201ENST00000458585 616 ntBASIC23.37■■□□□ 1.33
COL5A2P05997 HLA-J-203ENST00000494367 1087 ntBASIC23.37■■□□□ 1.33
COL5A2P05997 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
COL5A2P05997 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC23.37■■□□□ 1.33
COL5A2P05997 AC004835.2-201ENST00000603762 682 ntBASIC23.37■■□□□ 1.33
COL5A2P05997 AC105339.1-204ENST00000636249 355 ntBASIC23.37■■□□□ 1.33
COL5A2P05997 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL5A2P05997 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL5A2P05997 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
COL5A2P05997 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.37■■□□□ 1.33
COL5A2P05997 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.37■■□□□ 1.33
COL5A2P05997 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL5A2P05997 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.36■■□□□ 1.33
COL5A2P05997 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL5A2P05997 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.36■■□□□ 1.33
COL5A2P05997 GGTLC5P-201ENST00000617623 998 ntBASIC23.36■■□□□ 1.33
COL5A2P05997 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL5A2P05997 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.36■■□□□ 1.33
COL5A2P05997 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL5A2P05997 AC126763.1-201ENST00000552015 2118 ntBASIC23.36■■□□□ 1.33
COL5A2P05997 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL5A2P05997 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.36■■□□□ 1.33
COL5A2P05997 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
COL5A2P05997 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.36■■□□□ 1.33
COL5A2P05997 PTMS-202ENST00000389462 773 ntTSL 2 BASIC23.36■■□□□ 1.33
COL5A2P05997 PAWRP1-201ENST00000451083 565 ntBASIC23.36■■□□□ 1.33
COL5A2P05997 GREM1-201ENST00000560677 623 ntTSL 4 BASIC23.36■■□□□ 1.33
COL5A2P05997 AC109462.3-201ENST00000573934 613 ntBASIC23.36■■□□□ 1.33
COL5A2P05997 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL5A2P05997 AC023141.13-201ENST00000604991 943 ntBASIC23.36■■□□□ 1.33
COL5A2P05997 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
COL5A2P05997 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
COL5A2P05997 AC009336.1-201ENST00000608941 1553 ntBASIC23.35■■□□□ 1.33
COL5A2P05997 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
COL5A2P05997 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.35■■□□□ 1.33
COL5A2P05997 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.35■■□□□ 1.33
COL5A2P05997 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
COL5A2P05997 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL5A2P05997 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
COL5A2P05997 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.34■■□□□ 1.33
COL5A2P05997 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL5A2P05997 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms