Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.48■■□□□ 1.03
APPP05067 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
APPP05067 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.48■■□□□ 1.03
APPP05067 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
APPP05067 AC104819.1-201ENST00000504587 486 ntBASIC21.48■■□□□ 1.03
APPP05067 AC112698.1-201ENST00000510299 916 ntBASIC21.48■■□□□ 1.03
APPP05067 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.48■■□□□ 1.03
APPP05067 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.48■■□□□ 1.03
APPP05067 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.48■■□□□ 1.03
APPP05067 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.48■■□□□ 1.03
APPP05067 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
APPP05067 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.48■■□□□ 1.03
APPP05067 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.48■■□□□ 1.03
APPP05067 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
APPP05067 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.47■■□□□ 1.03
APPP05067 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APPP05067 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
APPP05067 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.47■■□□□ 1.03
APPP05067 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
APPP05067 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 KRT17P6-201ENST00000453795 1220 ntBASIC21.47■■□□□ 1.03
APPP05067 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.47■■□□□ 1.03
APPP05067 AP005901.3-202ENST00000581653 237 ntBASIC21.47■■□□□ 1.03
APPP05067 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.47■■□□□ 1.03
APPP05067 CLEC4GP1-201ENST00000596555 870 ntBASIC21.47■■□□□ 1.03
APPP05067 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.47■■□□□ 1.03
APPP05067 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
APPP05067 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.47■■□□□ 1.03
APPP05067 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.47■■□□□ 1.03
APPP05067 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
APPP05067 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
APPP05067 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APPP05067 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.46■■□□□ 1.03
APPP05067 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.46■■□□□ 1.03
APPP05067 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.46■■□□□ 1.03
APPP05067 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.46■■□□□ 1.03
APPP05067 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.46■■□□□ 1.03
APPP05067 AC012615.1-201ENST00000565797 1299 ntBASIC21.46■■□□□ 1.03
APPP05067 PRELID1P1-202ENST00000567272 903 ntBASIC21.46■■□□□ 1.03
APPP05067 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.46■■□□□ 1.03
APPP05067 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.46■■□□□ 1.03
APPP05067 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.46■■□□□ 1.03
APPP05067 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
APPP05067 AC012313.10-201ENST00000623509 926 ntBASIC21.46■■□□□ 1.03
APPP05067 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.46■■□□□ 1.03
APPP05067 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.46■■□□□ 1.03
APPP05067 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
APPP05067 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
APPP05067 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 AC022898.2-201ENST00000616822 1312 ntBASIC21.46■■□□□ 1.03
APPP05067 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
APPP05067 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.46■■□□□ 1.03
APPP05067 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.46■■□□□ 1.03
APPP05067 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APPP05067 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.46■■□□□ 1.03
APPP05067 OR6D1P-202ENST00000641007 5290 ntBASIC21.45■■□□□ 1.02
APPP05067 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
APPP05067 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APPP05067 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms