Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC067852.2-201ENST00000590513 2313 ntBASIC18.77■□□□□ 0.6
APOEP02649 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.77■□□□□ 0.6
APOEP02649 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.77■□□□□ 0.6
APOEP02649 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.77■□□□□ 0.6
APOEP02649 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.77■□□□□ 0.6
APOEP02649 AL592071.1-201ENST00000611956 408 ntBASIC18.77■□□□□ 0.6
APOEP02649 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
APOEP02649 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOEP02649 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.77■□□□□ 0.6
APOEP02649 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.77■□□□□ 0.6
APOEP02649 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.77■□□□□ 0.59
APOEP02649 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.77■□□□□ 0.59
APOEP02649 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
APOEP02649 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
APOEP02649 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
APOEP02649 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
APOEP02649 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
APOEP02649 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.76■□□□□ 0.59
APOEP02649 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.76■□□□□ 0.59
APOEP02649 AC093677.2-201ENST00000600169 1863 ntBASIC18.76■□□□□ 0.59
APOEP02649 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 AC093010.1-201ENST00000473625 1624 ntBASIC18.76■□□□□ 0.59
APOEP02649 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.76■□□□□ 0.59
APOEP02649 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.76■□□□□ 0.59
APOEP02649 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.76■□□□□ 0.59
APOEP02649 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.76■□□□□ 0.59
APOEP02649 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
APOEP02649 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.76■□□□□ 0.59
APOEP02649 AP002414.4-201ENST00000589764 1148 ntBASIC18.76■□□□□ 0.59
APOEP02649 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOEP02649 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.75■□□□□ 0.59
APOEP02649 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
APOEP02649 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
APOEP02649 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.75■□□□□ 0.59
APOEP02649 KRT18P65-201ENST00000439811 1286 ntBASIC18.75■□□□□ 0.59
APOEP02649 HCG4P8-203ENST00000443049 980 ntBASIC18.75■□□□□ 0.59
APOEP02649 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.75■□□□□ 0.59
APOEP02649 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.75■□□□□ 0.59
APOEP02649 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.75■□□□□ 0.59
APOEP02649 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.75■□□□□ 0.59
APOEP02649 AC092119.3-201ENST00000612618 583 ntBASIC18.75■□□□□ 0.59
APOEP02649 NPAP1P7-201ENST00000613027 823 ntBASIC18.75■□□□□ 0.59
APOEP02649 AC009154.2-201ENST00000621177 724 ntBASIC18.75■□□□□ 0.59
APOEP02649 AC124864.1-201ENST00000623408 392 ntBASIC18.75■□□□□ 0.59
APOEP02649 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.75■□□□□ 0.59
APOEP02649 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
APOEP02649 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOEP02649 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.74■□□□□ 0.59
APOEP02649 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.74■□□□□ 0.59
APOEP02649 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.74■□□□□ 0.59
APOEP02649 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
APOEP02649 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms