Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 CICP6-201ENST00000457191 2729 ntBASIC15.15■□□□□ 0.02
HLA-AP01891 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HLA-AP01891 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 FAM201B-201ENST00000458407 597 ntBASIC15.15■□□□□ 0.02
HLA-AP01891 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 AC073648.6-201ENST00000641589 218 ntBASIC15.15■□□□□ 0.02
HLA-AP01891 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-AP01891 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-AP01891 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HLA-AP01891 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-AP01891 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-AP01891 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-AP01891 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-AP01891 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-AP01891 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 Z85996.1-201ENST00000494644 937 ntBASIC15.14■□□□□ 0.01
HLA-AP01891 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-AP01891 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-AP01891 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-AP01891 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-AP01891 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-AP01891 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-AP01891 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-AP01891 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-AP01891 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-AP01891 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HLA-AP01891 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-AP01891 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-AP01891 AC133963.1-201ENST00000504166 1679 ntBASIC15.13■□□□□ 0.01
HLA-AP01891 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-AP01891 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-AP01891 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-AP01891 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-AP01891 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-AP01891 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-AP01891 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.13■□□□□ 0.01
HLA-AP01891 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms