Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 PTCHD3P3-201ENST00000403073 906 ntBASIC19.26■□□□□ 0.67
TIMP1P01033 AC004461.1-201ENST00000412461 403 ntBASIC19.26■□□□□ 0.67
TIMP1P01033 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.26■□□□□ 0.67
TIMP1P01033 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.26■□□□□ 0.67
TIMP1P01033 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TIMP1P01033 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.26■□□□□ 0.67
TIMP1P01033 AC023141.13-201ENST00000604991 943 ntBASIC19.26■□□□□ 0.67
TIMP1P01033 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.26■□□□□ 0.67
TIMP1P01033 AC092902.6-201ENST00000641783 218 ntBASIC19.26■□□□□ 0.67
TIMP1P01033 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TIMP1P01033 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TIMP1P01033 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.26■□□□□ 0.67
TIMP1P01033 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TIMP1P01033 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.25■□□□□ 0.67
TIMP1P01033 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.25■□□□□ 0.67
TIMP1P01033 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TIMP1P01033 AP002414.1-201ENST00000391405 1147 ntBASIC19.25■□□□□ 0.67
TIMP1P01033 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.25■□□□□ 0.67
TIMP1P01033 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.25■□□□□ 0.67
TIMP1P01033 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.25■□□□□ 0.67
TIMP1P01033 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.25■□□□□ 0.67
TIMP1P01033 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.25■□□□□ 0.67
TIMP1P01033 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TIMP1P01033 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.25■□□□□ 0.67
TIMP1P01033 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.25■□□□□ 0.67
TIMP1P01033 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TIMP1P01033 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.24■□□□□ 0.67
TIMP1P01033 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.24■□□□□ 0.67
TIMP1P01033 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.24■□□□□ 0.67
TIMP1P01033 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.24■□□□□ 0.67
TIMP1P01033 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TIMP1P01033 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.24■□□□□ 0.67
TIMP1P01033 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
TIMP1P01033 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.24■□□□□ 0.67
TIMP1P01033 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TIMP1P01033 ESPNP-201ENST00000270691 2015 ntBASIC19.24■□□□□ 0.67
TIMP1P01033 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TIMP1P01033 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
TIMP1P01033 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TIMP1P01033 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.23■□□□□ 0.67
TIMP1P01033 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.23■□□□□ 0.67
TIMP1P01033 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.23■□□□□ 0.67
TIMP1P01033 MIR4745-201ENST00000577608 62 ntBASIC19.23■□□□□ 0.67
TIMP1P01033 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.23■□□□□ 0.67
TIMP1P01033 AC005498.2-205ENST00000593218 784 ntBASIC19.23■□□□□ 0.67
TIMP1P01033 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.23■□□□□ 0.67
TIMP1P01033 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.23■□□□□ 0.67
TIMP1P01033 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TIMP1P01033 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms