Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ZBED1O96006 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.93■□□□□ 0.62
ZBED1O96006 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.93■□□□□ 0.62
ZBED1O96006 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.93■□□□□ 0.62
ZBED1O96006 AC068472.1-201ENST00000474589 881 ntBASIC18.93■□□□□ 0.62
ZBED1O96006 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.93■□□□□ 0.62
ZBED1O96006 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZBED1O96006 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.93■□□□□ 0.62
ZBED1O96006 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.93■□□□□ 0.62
ZBED1O96006 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.93■□□□□ 0.62
ZBED1O96006 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.93■□□□□ 0.62
ZBED1O96006 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
ZBED1O96006 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
ZBED1O96006 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.93■□□□□ 0.62
ZBED1O96006 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
ZBED1O96006 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZBED1O96006 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.92■□□□□ 0.62
ZBED1O96006 REXO1L9P-201ENST00000604264 2108 ntBASIC18.92■□□□□ 0.62
ZBED1O96006 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ZBED1O96006 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.92■□□□□ 0.62
ZBED1O96006 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.92■□□□□ 0.62
ZBED1O96006 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.92■□□□□ 0.62
ZBED1O96006 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ZBED1O96006 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.92■□□□□ 0.62
ZBED1O96006 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
ZBED1O96006 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.92■□□□□ 0.62
ZBED1O96006 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ZBED1O96006 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ZBED1O96006 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZBED1O96006 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.92■□□□□ 0.62
ZBED1O96006 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
ZBED1O96006 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ZBED1O96006 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.91■□□□□ 0.62
ZBED1O96006 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.91■□□□□ 0.62
ZBED1O96006 LINC00265-3P-201ENST00000447588 903 ntBASIC18.91■□□□□ 0.62
ZBED1O96006 TOB2P1-201ENST00000469761 992 ntBASIC18.91■□□□□ 0.62
ZBED1O96006 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.91■□□□□ 0.62
ZBED1O96006 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.91■□□□□ 0.62
ZBED1O96006 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.91■□□□□ 0.62
ZBED1O96006 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.91■□□□□ 0.62
ZBED1O96006 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
ZBED1O96006 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.91■□□□□ 0.62
ZBED1O96006 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
ZBED1O96006 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZBED1O96006 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
ZBED1O96006 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms