Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 LETM1P2-201ENST00000597330 2178 ntBASIC15.92■□□□□ 0.14
CNOT4O95628 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT4O95628 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT4O95628 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT4O95628 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CNOT4O95628 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.92■□□□□ 0.14
CNOT4O95628 NUS1P1-201ENST00000446295 882 ntBASIC15.92■□□□□ 0.14
CNOT4O95628 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
CNOT4O95628 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.92■□□□□ 0.14
CNOT4O95628 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT4O95628 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CNOT4O95628 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CNOT4O95628 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CNOT4O95628 LINC00167-201ENST00000530583 1419 ntBASIC15.92■□□□□ 0.14
CNOT4O95628 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT4O95628 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT4O95628 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT4O95628 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CNOT4O95628 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CNOT4O95628 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CNOT4O95628 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CNOT4O95628 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT4O95628 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CNOT4O95628 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 FAAHP1-202ENST00000446499 1238 ntBASIC15.91■□□□□ 0.14
CNOT4O95628 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.91■□□□□ 0.14
CNOT4O95628 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT4O95628 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.91■□□□□ 0.14
CNOT4O95628 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.91■□□□□ 0.14
CNOT4O95628 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.91■□□□□ 0.14
CNOT4O95628 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT4O95628 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CNOT4O95628 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.91■□□□□ 0.14
CNOT4O95628 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT4O95628 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.9■□□□□ 0.14
CNOT4O95628 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 AC233702.3-201ENST00000578656 1387 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.9■□□□□ 0.14
CNOT4O95628 LINC00602-201ENST00000629776 2065 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CNOT4O95628 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CNOT4O95628 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.9■□□□□ 0.14
CNOT4O95628 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CNOT4O95628 TOB2P1-201ENST00000469761 992 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 AC068472.1-201ENST00000474589 881 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CNOT4O95628 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CNOT4O95628 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.9■□□□□ 0.14
CNOT4O95628 AC005082.1-201ENST00000413042 2259 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 KRT8P10-201ENST00000450021 1447 ntBASIC15.9■□□□□ 0.14
CNOT4O95628 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.9■□□□□ 0.14
CNOT4O95628 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT4O95628 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CNOT4O95628 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms