Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SNX4O95219 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
SNX4O95219 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.87■□□□□ 0.29
SNX4O95219 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.87■□□□□ 0.29
SNX4O95219 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SNX4O95219 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 NFIC-211ENST00000641145 8399 ntBASIC16.86■□□□□ 0.29
SNX4O95219 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.86■□□□□ 0.29
SNX4O95219 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SNX4O95219 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SNX4O95219 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNX4O95219 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.86■□□□□ 0.29
SNX4O95219 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX4O95219 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SNX4O95219 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.85■□□□□ 0.29
SNX4O95219 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SNX4O95219 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 PVRIG2P-201ENST00000435460 978 ntBASIC16.85■□□□□ 0.29
SNX4O95219 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
SNX4O95219 VENTXP5-201ENST00000523979 775 ntBASIC16.85■□□□□ 0.29
SNX4O95219 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.85■□□□□ 0.29
SNX4O95219 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX4O95219 AL136038.4-201ENST00000603606 1261 ntBASIC16.85■□□□□ 0.29
SNX4O95219 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX4O95219 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SNX4O95219 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNX4O95219 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNX4O95219 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNX4O95219 AL163051.1-201ENST00000569214 1512 ntBASIC16.85■□□□□ 0.29
SNX4O95219 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
SNX4O95219 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNX4O95219 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX4O95219 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX4O95219 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms