Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC27.74■■■□□ 2.03
PCF11O94913 AC103564.2-201ENST00000432853 1299 ntBASIC27.74■■■□□ 2.03
PCF11O94913 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.74■■■□□ 2.03
PCF11O94913 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC27.74■■■□□ 2.03
PCF11O94913 MIR1199-201ENST00000621445 119 ntBASIC27.74■■■□□ 2.03
PCF11O94913 AC134684.3-201ENST00000641758 218 ntBASIC27.74■■■□□ 2.03
PCF11O94913 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
PCF11O94913 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC27.74■■■□□ 2.03
PCF11O94913 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC27.74■■■□□ 2.03
PCF11O94913 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC27.74■■■□□ 2.03
PCF11O94913 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
PCF11O94913 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PCF11O94913 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
PCF11O94913 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.73■■■□□ 2.03
PCF11O94913 ALG1L5P-201ENST00000482043 771 ntBASIC27.73■■■□□ 2.03
PCF11O94913 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
PCF11O94913 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 HARS-201ENST00000307633 1780 ntTSL 2 BASIC27.73■■■□□ 2.03
PCF11O94913 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 AL138781.2-201ENST00000617896 1843 ntBASIC27.73■■■□□ 2.03
PCF11O94913 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 AC006504.4-201ENST00000592118 1568 ntBASIC27.73■■■□□ 2.03
PCF11O94913 DNAJB3-202ENST00000449667 1266 ntBASIC27.73■■■□□ 2.03
PCF11O94913 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.73■■■□□ 2.03
PCF11O94913 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.73■■■□□ 2.03
PCF11O94913 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC27.73■■■□□ 2.03
PCF11O94913 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCF11O94913 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
PCF11O94913 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC27.72■■■□□ 2.03
PCF11O94913 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
PCF11O94913 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC27.72■■■□□ 2.03
PCF11O94913 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.72■■■□□ 2.03
PCF11O94913 AL020989.1-201ENST00000422979 469 ntBASIC27.72■■■□□ 2.03
PCF11O94913 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 S100A2-206ENST00000497140 697 ntTSL 2 BASIC27.72■■■□□ 2.03
PCF11O94913 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC27.72■■■□□ 2.03
PCF11O94913 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.72■■■□□ 2.03
PCF11O94913 AC064836.3-201ENST00000607928 673 ntBASIC27.72■■■□□ 2.03
PCF11O94913 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC27.72■■■□□ 2.03
PCF11O94913 CAND2-206ENST00000626378 333 ntTSL 5 BASIC27.72■■■□□ 2.03
PCF11O94913 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC27.72■■■□□ 2.03
PCF11O94913 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCF11O94913 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC27.71■■■□□ 2.03
PCF11O94913 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC27.71■■■□□ 2.03
PCF11O94913 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC27.71■■■□□ 2.03
PCF11O94913 FAM8A3P-201ENST00000427218 844 ntBASIC27.71■■■□□ 2.03
PCF11O94913 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.71■■■□□ 2.03
PCF11O94913 COPE-211ENST00000600932 1144 ntTSL 5 BASIC27.71■■■□□ 2.03
PCF11O94913 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC27.71■■■□□ 2.03
PCF11O94913 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
PCF11O94913 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC27.71■■■□□ 2.03
PCF11O94913 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC27.71■■■□□ 2.03
PCF11O94913 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC27.71■■■□□ 2.03
PCF11O94913 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCF11O94913 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC27.71■■■□□ 2.03
PCF11O94913 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PCF11O94913 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCF11O94913 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCF11O94913 BX276092.7-203ENST00000637198 1536 ntBASIC27.7■■■□□ 2.03
PCF11O94913 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCF11O94913 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCF11O94913 LBH-203ENST00000404397 543 ntTSL 4 BASIC27.7■■■□□ 2.03
PCF11O94913 METTL21AP1-201ENST00000438852 635 ntBASIC27.7■■■□□ 2.03
PCF11O94913 RIN3-211ENST00000557762 517 ntTSL 3 BASIC27.7■■■□□ 2.03
PCF11O94913 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC27.7■■■□□ 2.03
PCF11O94913 AC109462.3-201ENST00000573934 613 ntBASIC27.7■■■□□ 2.03
PCF11O94913 STK25P1-201ENST00000585406 838 ntBASIC27.7■■■□□ 2.03
PCF11O94913 AC004706.3-202ENST00000621574 984 ntBASIC27.7■■■□□ 2.03
PCF11O94913 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC27.7■■■□□ 2.03
PCF11O94913 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PCF11O94913 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC27.7■■■□□ 2.02
PCF11O94913 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC27.7■■■□□ 2.02
PCF11O94913 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PCF11O94913 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms