Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 HBZP1-201ENST00000354915 429 ntBASIC18.71■□□□□ 0.59
OPHN1O60890 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 AL845331.1-201ENST00000424978 1190 ntBASIC18.71■□□□□ 0.59
OPHN1O60890 SLC25A6P5-201ENST00000435663 894 ntBASIC18.71■□□□□ 0.59
OPHN1O60890 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
OPHN1O60890 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.71■□□□□ 0.59
OPHN1O60890 AC034232.1-201ENST00000506026 1064 ntBASIC18.71■□□□□ 0.59
OPHN1O60890 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.71■□□□□ 0.59
OPHN1O60890 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.71■□□□□ 0.59
OPHN1O60890 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.71■□□□□ 0.59
OPHN1O60890 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.71■□□□□ 0.59
OPHN1O60890 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 AC099343.3-201ENST00000605834 2503 ntBASIC18.71■□□□□ 0.59
OPHN1O60890 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
OPHN1O60890 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
OPHN1O60890 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
OPHN1O60890 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
OPHN1O60890 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 AC008764.6-201ENST00000595909 2069 ntBASIC18.7■□□□□ 0.58
OPHN1O60890 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
OPHN1O60890 FLJ13224-201ENST00000313737 1514 ntBASIC18.7■□□□□ 0.58
OPHN1O60890 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
OPHN1O60890 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
OPHN1O60890 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.7■□□□□ 0.58
OPHN1O60890 FAAHP1-202ENST00000446499 1238 ntBASIC18.7■□□□□ 0.58
OPHN1O60890 FDX1P1-201ENST00000449115 551 ntBASIC18.7■□□□□ 0.58
OPHN1O60890 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.7■□□□□ 0.58
OPHN1O60890 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.7■□□□□ 0.58
OPHN1O60890 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.7■□□□□ 0.58
OPHN1O60890 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
OPHN1O60890 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.7■□□□□ 0.58
OPHN1O60890 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
OPHN1O60890 AC068880.1-201ENST00000507289 2297 ntBASIC18.7■□□□□ 0.58
OPHN1O60890 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.7■□□□□ 0.58
OPHN1O60890 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.69■□□□□ 0.58
OPHN1O60890 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.69■□□□□ 0.58
OPHN1O60890 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.69■□□□□ 0.58
OPHN1O60890 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 SPDYE13P-201ENST00000445314 798 ntBASIC18.69■□□□□ 0.58
OPHN1O60890 TSSC2-201ENST00000450217 709 ntBASIC18.69■□□□□ 0.58
OPHN1O60890 BX276092.5-203ENST00000456199 560 ntBASIC18.69■□□□□ 0.58
OPHN1O60890 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.69■□□□□ 0.58
OPHN1O60890 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 AC010240.3-201ENST00000607688 395 ntBASIC18.69■□□□□ 0.58
OPHN1O60890 AL121672.3-201ENST00000608644 468 ntBASIC18.69■□□□□ 0.58
OPHN1O60890 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.69■□□□□ 0.58
OPHN1O60890 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
OPHN1O60890 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.69■□□□□ 0.58
OPHN1O60890 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
OPHN1O60890 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
OPHN1O60890 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
OPHN1O60890 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.68■□□□□ 0.58
OPHN1O60890 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms