Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 MINOS1P3-201ENST00000457048 203 ntBASIC18.15■□□□□ 0.5
PRAMEF11O60813 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 AC006116.8-202ENST00000587620 1550 ntBASIC18.15■□□□□ 0.5
PRAMEF11O60813 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 NOC2LP2-201ENST00000407594 1944 ntBASIC18.15■□□□□ 0.5
PRAMEF11O60813 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF11O60813 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.15■□□□□ 0.5
PRAMEF11O60813 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
PRAMEF11O60813 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF11O60813 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF11O60813 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF11O60813 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.14■□□□□ 0.5
PRAMEF11O60813 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF11O60813 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF11O60813 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF11O60813 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 AC009533.2-201ENST00000543664 586 ntBASIC18.14■□□□□ 0.49
PRAMEF11O60813 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 MIR3652-201ENST00000579335 131 ntBASIC18.14■□□□□ 0.49
PRAMEF11O60813 BNIP3P18-201ENST00000593976 575 ntBASIC18.14■□□□□ 0.49
PRAMEF11O60813 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF11O60813 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF11O60813 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 AC010460.3-201ENST00000511359 1579 ntBASIC18.13■□□□□ 0.49
PRAMEF11O60813 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 AC007967.3-201ENST00000434308 558 ntBASIC18.13■□□□□ 0.49
PRAMEF11O60813 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF11O60813 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.13■□□□□ 0.49
PRAMEF11O60813 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms