Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AC012317.2-201ENST00000623305 2251 ntBASIC15.97■□□□□ 0.15
TRAF3IP2O43734 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 FAM86EP-206ENST00000510506 987 ntBASIC15.97■□□□□ 0.15
TRAF3IP2O43734 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAF3IP2O43734 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 TSPY22P-201ENST00000427496 604 ntBASIC15.96■□□□□ 0.15
TRAF3IP2O43734 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 AC112698.1-201ENST00000510299 916 ntBASIC15.96■□□□□ 0.15
TRAF3IP2O43734 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 AC087388.1-201ENST00000571370 1112 ntBASIC15.96■□□□□ 0.15
TRAF3IP2O43734 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 AC011498.5-201ENST00000592027 486 ntBASIC15.96■□□□□ 0.15
TRAF3IP2O43734 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAF3IP2O43734 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP2O43734 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP2O43734 AC068472.1-201ENST00000474589 881 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms