Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC2O43543 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XRCC2O43543 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.6■□□□□ 0.09
XRCC2O43543 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC2O43543 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
XRCC2O43543 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
XRCC2O43543 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 SPDYE15P-201ENST00000424157 909 ntBASIC15.59■□□□□ 0.09
XRCC2O43543 HLA-F-220ENST00000434407 884 ntBASIC15.59■□□□□ 0.09
XRCC2O43543 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC2O43543 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC2O43543 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
XRCC2O43543 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC2O43543 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC2O43543 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.59■□□□□ 0.09
XRCC2O43543 AC079602.3-201ENST00000623931 403 ntBASIC15.59■□□□□ 0.09
XRCC2O43543 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC2O43543 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
XRCC2O43543 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
XRCC2O43543 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 LINC00602-201ENST00000629776 2065 ntBASIC15.59■□□□□ 0.09
XRCC2O43543 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
XRCC2O43543 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.59■□□□□ 0.09
XRCC2O43543 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
XRCC2O43543 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
XRCC2O43543 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC2O43543 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.58■□□□□ 0.09
XRCC2O43543 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC2O43543 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
XRCC2O43543 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
XRCC2O43543 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 TSPY5P-201ENST00000426936 936 ntBASIC15.58■□□□□ 0.08
XRCC2O43543 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.58■□□□□ 0.08
XRCC2O43543 KRT18P57-201ENST00000443599 1254 ntBASIC15.58■□□□□ 0.08
XRCC2O43543 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
XRCC2O43543 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.58■□□□□ 0.08
XRCC2O43543 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.58■□□□□ 0.08
XRCC2O43543 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.58■□□□□ 0.08
XRCC2O43543 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 AC116407.2-201ENST00000613639 860 ntBASIC15.58■□□□□ 0.08
XRCC2O43543 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.58■□□□□ 0.08
XRCC2O43543 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.08
XRCC2O43543 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.58■□□□□ 0.08
XRCC2O43543 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
XRCC2O43543 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.58■□□□□ 0.08
XRCC2O43543 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
XRCC2O43543 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
XRCC2O43543 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
XRCC2O43543 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
XRCC2O43543 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
XRCC2O43543 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
XRCC2O43543 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.57■□□□□ 0.08
XRCC2O43543 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
XRCC2O43543 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
XRCC2O43543 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.57■□□□□ 0.08
XRCC2O43543 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms