Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CEP290O15078 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
CEP290O15078 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CEP290O15078 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.25■□□□□ 0.67
CEP290O15078 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.25■□□□□ 0.67
CEP290O15078 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.25■□□□□ 0.67
CEP290O15078 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.25■□□□□ 0.67
CEP290O15078 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
CEP290O15078 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CEP290O15078 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CEP290O15078 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.25■□□□□ 0.67
CEP290O15078 GPS2P2-201ENST00000430745 888 ntBASIC19.25■□□□□ 0.67
CEP290O15078 AC005237.2-201ENST00000434368 219 ntBASIC19.25■□□□□ 0.67
CEP290O15078 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.25■□□□□ 0.67
CEP290O15078 AC125807.1-201ENST00000483097 614 ntBASIC19.25■□□□□ 0.67
CEP290O15078 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.25■□□□□ 0.67
CEP290O15078 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.25■□□□□ 0.67
CEP290O15078 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CEP290O15078 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
CEP290O15078 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.24■□□□□ 0.67
CEP290O15078 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CEP290O15078 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.24■□□□□ 0.67
CEP290O15078 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 AD001527.2-201ENST00000622994 785 ntBASIC19.24■□□□□ 0.67
CEP290O15078 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CEP290O15078 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.24■□□□□ 0.67
CEP290O15078 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CEP290O15078 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CEP290O15078 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.24■□□□□ 0.67
CEP290O15078 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.24■□□□□ 0.67
CEP290O15078 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.24■□□□□ 0.67
CEP290O15078 AC017083.2-201ENST00000608069 979 ntBASIC19.24■□□□□ 0.67
CEP290O15078 AC068587.9-201ENST00000641814 219 ntBASIC19.24■□□□□ 0.67
CEP290O15078 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CEP290O15078 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CEP290O15078 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.23■□□□□ 0.67
CEP290O15078 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CEP290O15078 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.23■□□□□ 0.67
CEP290O15078 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.23■□□□□ 0.67
CEP290O15078 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.23■□□□□ 0.67
CEP290O15078 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.23■□□□□ 0.67
CEP290O15078 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CEP290O15078 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CEP290O15078 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CEP290O15078 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CEP290O15078 SIRPAP1-201ENST00000448467 1770 ntBASIC19.23■□□□□ 0.67
CEP290O15078 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CEP290O15078 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CEP290O15078 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.23■□□□□ 0.67
CEP290O15078 AC097493.3-201ENST00000509725 367 ntBASIC19.23■□□□□ 0.67
CEP290O15078 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.23■□□□□ 0.67
CEP290O15078 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CEP290O15078 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.22■□□□□ 0.67
CEP290O15078 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.22■□□□□ 0.67
CEP290O15078 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.22■□□□□ 0.67
CEP290O15078 AC004890.2-204ENST00000481968 304 ntBASIC19.22■□□□□ 0.67
CEP290O15078 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.22■□□□□ 0.67
CEP290O15078 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 AC132938.5-201ENST00000624980 1813 ntBASIC19.22■□□□□ 0.67
CEP290O15078 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.22■□□□□ 0.67
CEP290O15078 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
CEP290O15078 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
CEP290O15078 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.22■□□□□ 0.67
CEP290O15078 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms