Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 LINC00304-203ENST00000565008 1864 ntBASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 AC007663.1-201ENST00000438948 1240 ntBASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM49D1C9J1S8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 UNC93B2-201ENST00000285383 730 ntBASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 GCSHP5-201ENST00000443090 522 ntBASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM49D1C9J1S8 AC022898.2-201ENST00000616822 1312 ntBASIC17.96■□□□□ 0.46
TRIM49D1C9J1S8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM49D1C9J1S8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM49D1C9J1S8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
TRIM49D1C9J1S8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.46
TRIM49D1C9J1S8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 NKILA-202ENST00000614771 2598 ntBASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM49D1C9J1S8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms