Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 AL031133.1-201ENST00000406807 723 ntBASIC16.77■□□□□ 0.28
CLCA1A8K7I4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.77■□□□□ 0.28
CLCA1A8K7I4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCA1A8K7I4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCA1A8K7I4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 KRT18P38-201ENST00000449496 1282 ntBASIC16.76■□□□□ 0.27
CLCA1A8K7I4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 AC141586.5-201ENST00000624546 2050 ntBASIC16.76■□□□□ 0.27
CLCA1A8K7I4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLCA1A8K7I4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AL109659.2-201ENST00000606809 1674 ntBASIC16.75■□□□□ 0.27
CLCA1A8K7I4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AD000864.1-201ENST00000624076 2295 ntBASIC16.75■□□□□ 0.27
CLCA1A8K7I4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AL671277.2-201ENST00000458060 996 ntBASIC16.75■□□□□ 0.27
CLCA1A8K7I4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCA1A8K7I4 PP12613-201ENST00000424958 2230 ntBASIC16.74■□□□□ 0.27
CLCA1A8K7I4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCA1A8K7I4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLCA1A8K7I4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CLCA1A8K7I4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms