Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPSF4LA6NMK7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 AC020916.1-201ENST00000587762 1774 ntBASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 AC139713.2-201ENST00000641328 2723 ntBASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 MIR3917-201ENST00000580971 93 ntBASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPSF4LA6NMK7 PP12613-201ENST00000424958 2230 ntBASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CPSF4LA6NMK7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 NEK4P2-201ENST00000580004 1012 ntBASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 AL157888.1-201ENST00000631930 593 ntBASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 AC012313.1-201ENST00000593393 3059 ntBASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPSF4LA6NMK7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms