Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 STARP1-201ENST00000397973 869 ntBASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49BA6NDI0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 KRT89P-201ENST00000620027 1478 ntBASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 LINC00304-203ENST00000565008 1864 ntBASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 AC006011.2-201ENST00000621313 1158 ntBASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49BA6NDI0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 REXO1L11P-201ENST00000620964 1927 ntBASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 BX664615.1-201ENST00000443558 458 ntBASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 AL031432.5-201ENST00000641059 760 ntBASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM49BA6NDI0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 AC020916.1-201ENST00000587762 1774 ntBASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 AC211429.1-201ENST00000415277 523 ntBASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM49BA6NDI0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms