Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 AC005332.3-201ENST00000589904 676 ntBASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 GPR32P1-201ENST00000601788 811 ntBASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 AL353692.3-201ENST00000407031 1396 ntBASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 TSPY12P-201ENST00000421279 868 ntBASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC162PA2VCL2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AL049597.2-201ENST00000565575 961 ntBASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AL390719.2-201ENST00000606993 987 ntBASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AC009154.2-201ENST00000621177 724 ntBASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC162PA2VCL2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 Z83836.1-201ENST00000624605 1642 ntBASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC162PA2VCL2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms