Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 AC093010.1-201ENST00000473625 1624 ntBASIC17.98■□□□□ 0.47
CCDC189A1A4V9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC189A1A4V9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 AL096828.2-201ENST00000567259 1965 ntBASIC17.97■□□□□ 0.47
CCDC189A1A4V9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 GNAS-203ENST00000306120 1878 ntBASIC17.97■□□□□ 0.47
CCDC189A1A4V9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.97■□□□□ 0.47
CCDC189A1A4V9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC189A1A4V9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 AC128688.1-201ENST00000487626 519 ntBASIC17.96■□□□□ 0.47
CCDC189A1A4V9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 UBALD1-205ENST00000590891 2641 ntBASIC17.96■□□□□ 0.47
CCDC189A1A4V9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC189A1A4V9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
CCDC189A1A4V9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.96■□□□□ 0.46
CCDC189A1A4V9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC189A1A4V9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms