Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 AC021087.4-201ENST00000563761 564 ntBASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 AC139887.3-201ENST00000568585 713 ntBASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 AL049840.3-201ENST00000602669 611 ntBASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3DA0A087WVF3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 FAM215A-202ENST00000632077 792 ntBASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 AC243591.1-201ENST00000452967 1364 ntBASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3DA0A087WVF3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 RPS2P1-201ENST00000434010 821 ntBASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.77■□□□□ 0.44
TBC1D3DA0A087WVF3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TBC1D3DA0A087WVF3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.77■□□□□ 0.43
TBC1D3DA0A087WVF3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TBC1D3DA0A087WVF3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TBC1D3DA0A087WVF3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms