Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV26-1A0A087WT03 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV26-1A0A087WT03 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV26-1A0A087WT03 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV26-1A0A087WT03 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.02□□□□□ -0.32
TRAV26-1A0A087WT03 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV26-1A0A087WT03 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 RNF152P1-201ENST00000397754 604 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AC104076.2-201ENST00000448912 469 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 GCSHP2-201ENST00000560971 527 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AL049597.2-201ENST00000565575 961 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AC011558.1-201ENST00000623459 338 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AC068880.1-201ENST00000507289 2297 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 HOXB1-202ENST00000577092 1414 ntBASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV26-1A0A087WT03 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 AL499627.1-201ENST00000569373 2188 ntBASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 AP000593.1-201ENST00000393668 712 ntBASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 TSPY5P-201ENST00000426936 936 ntBASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 DUX4L26-201ENST00000489078 1255 ntBASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 KRT18P41-201ENST00000518924 1277 ntBASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 AL441883.1-201ENST00000566170 1045 ntBASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV26-1A0A087WT03 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms