Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC26.89■■□□□ 1.9
CDC42BPBQ9Y5S2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC26.89■■□□□ 1.89
CDC42BPBQ9Y5S2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
CDC42BPBQ9Y5S2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CDC42BPBQ9Y5S2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CDC42BPBQ9Y5S2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AC100803.2-201ENST00000562459 1963 ntBASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AL645939.2-201ENST00000427340 991 ntBASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AC109462.3-201ENST00000573934 613 ntBASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AP002472.1-201ENST00000577490 586 ntBASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 AC073592.3-201ENST00000625118 1834 ntBASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDC42BPBQ9Y5S2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 AL139400.1-201ENST00000366220 510 ntBASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 SNHG9-202ENST00000564014 471 ntBASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 AC009336.1-201ENST00000608941 1553 ntBASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDC42BPBQ9Y5S2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 AC004877.2-201ENST00000623941 599 ntBASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CDC42BPBQ9Y5S2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 AP002414.1-201ENST00000391405 1147 ntBASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 CROCCP3-202ENST00000420820 1947 ntBASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 CEND1P1-201ENST00000451006 455 ntBASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 STK25P1-201ENST00000585406 838 ntBASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 AC091812.2-201ENST00000619081 385 ntBASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CDC42BPBQ9Y5S2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC42BPBQ9Y5S2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms