Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 KRT18P31-201ENST00000506277 1292 ntBASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 UNC93B7-201ENST00000509439 705 ntBASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN16Q9Y5I7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
CLDN16Q9Y5I7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CLDN16Q9Y5I7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 COX5BP2-201ENST00000392354 334 ntBASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 DDX43P3-201ENST00000441064 443 ntBASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AC096582.2-201ENST00000510860 516 ntBASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 PRELID1P1-202ENST00000567272 903 ntBASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN16Q9Y5I7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 NUS1P2-201ENST00000417358 873 ntBASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 MIR5100-201ENST00000579544 119 ntBASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN16Q9Y5I7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms