Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA3Q9Y5H0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 NSUN5P1-202ENST00000421140 1535 ntBASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 NSUN5P2-203ENST00000457352 1529 ntBASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 AP000593.1-201ENST00000393668 712 ntBASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA3Q9Y5H0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 KRT8P50-201ENST00000562022 1438 ntBASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 AC139713.2-201ENST00000641328 2723 ntBASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.43■□□□□ 0.38
PCDHGA3Q9Y5H0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA3Q9Y5H0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms