Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA4Q9Y5G9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 KRT8P10-201ENST00000450021 1447 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 KRT17P6-201ENST00000453795 1220 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 SEC1P-202ENST00000473944 940 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 AC104390.1-201ENST00000555663 520 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 MIR3180-1-201ENST00000580374 94 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 MIR3180-3-201ENST00000584616 94 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 AC024243.1-201ENST00000609234 778 ntBASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA4Q9Y5G9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AP000347.1-202ENST00000435868 847 ntBASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 UNC93B7-201ENST00000509439 705 ntBASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AC103798.2-201ENST00000624292 632 ntBASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AC016734.2-201ENST00000624325 1377 ntBASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA4Q9Y5G9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 MYLKP1-201ENST00000509077 1580 ntBASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 SEC63P1-201ENST00000425785 1258 ntBASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA4Q9Y5G9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms