Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 AC093503.3-201ENST00000624917 2352 ntBASIC18.66■□□□□ 0.58
YIPF1Q9Y548 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 COX5BP2-201ENST00000392354 334 ntBASIC18.66■□□□□ 0.58
YIPF1Q9Y548 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 POLD2P1-201ENST00000511220 997 ntBASIC18.66■□□□□ 0.58
YIPF1Q9Y548 IGHV3-22-201ENST00000520721 359 ntBASIC18.66■□□□□ 0.58
YIPF1Q9Y548 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 ZNF259P1-201ENST00000407656 1365 ntBASIC18.66■□□□□ 0.58
YIPF1Q9Y548 AC098818.2-201ENST00000564925 2320 ntBASIC18.66■□□□□ 0.58
YIPF1Q9Y548 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.66■□□□□ 0.58
YIPF1Q9Y548 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 GPALPP1-207ENST00000611650 899 ntBASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AC006538.3-201ENST00000612495 578 ntBASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AC073592.4-201ENST00000623827 446 ntBASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AC117500.6-201ENST00000624871 588 ntBASIC18.65■□□□□ 0.58
YIPF1Q9Y548 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AC104109.2-201ENST00000602919 1418 ntBASIC18.65■□□□□ 0.58
YIPF1Q9Y548 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.65■□□□□ 0.58
YIPF1Q9Y548 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.64■□□□□ 0.58
YIPF1Q9Y548 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
YIPF1Q9Y548 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
YIPF1Q9Y548 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YIPF1Q9Y548 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YIPF1Q9Y548 AC135776.1-201ENST00000319817 2481 ntBASIC18.64■□□□□ 0.58
YIPF1Q9Y548 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 LAGE3P1-201ENST00000425356 484 ntBASIC18.64■□□□□ 0.57
YIPF1Q9Y548 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 AL022326.1-202ENST00000641533 845 ntBASIC18.64■□□□□ 0.57
YIPF1Q9Y548 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms