Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
R3HCC1Q9Y3T6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 CROCCP1-201ENST00000426910 5675 ntBASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.56■□□□□ 0.88
R3HCC1Q9Y3T6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 AC087499.1-201ENST00000418141 1075 ntBASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 TSPY23P-201ENST00000440136 739 ntBASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 CCR12P-201ENST00000446203 998 ntBASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 AC128688.1-201ENST00000487626 519 ntBASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 AC133561.5-201ENST00000635547 218 ntBASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
R3HCC1Q9Y3T6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
R3HCC1Q9Y3T6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.53■□□□□ 0.88
R3HCC1Q9Y3T6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms