Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 AC009065.1-201ENST00000564055 1225 ntBASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 AC010240.3-201ENST00000607688 395 ntBASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RHBDD3Q9Y3P4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AC108860.2-201ENST00000562760 2183 ntBASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AC093010.1-201ENST00000473625 1624 ntBASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 SEC1P-202ENST00000473944 940 ntBASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 MIR3180-4-201ENST00000582223 153 ntBASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AC145285.6-201ENST00000604632 637 ntBASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RHBDD3Q9Y3P4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 PRORSD1P-202ENST00000563365 2154 ntBASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ECEL1P3-201ENST00000427961 737 ntBASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RHBDD3Q9Y3P4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.71■□□□□ 0.11
RHBDD3Q9Y3P4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms