Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 AC009102.3-201ENST00000623118 1491 ntBASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPRKBQ9Y3C4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TPRKBQ9Y3C4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.39■□□□□ 0.22
TPRKBQ9Y3C4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TPRKBQ9Y3C4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TPRKBQ9Y3C4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 SOX15-203ENST00000570788 1093 ntBASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 CICP6-201ENST00000457191 2729 ntBASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPRKBQ9Y3C4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 MIR149-201ENST00000384879 89 ntBASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 AC011270.2-201ENST00000624293 2550 ntBASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.38■□□□□ 0.21
TPRKBQ9Y3C4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TPRKBQ9Y3C4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms