Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPH3AQ9Y2J0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 KRT89P-201ENST00000620027 1478 ntBASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPH3AQ9Y2J0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.46■□□□□ 0.22
RPH3AQ9Y2J0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RPH3AQ9Y2J0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 AC092119.3-201ENST00000612618 583 ntBASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 IGHV3-41-201ENST00000613121 348 ntBASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 AC135776.1-201ENST00000319817 2481 ntBASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 ABALON-201ENST00000629058 1903 ntBASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPH3AQ9Y2J0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 AL354751.1-201ENST00000412768 1863 ntBASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 PHGDH-209ENST00000641074 1780 ntBASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 AL390961.4-201ENST00000623958 2535 ntBASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 AC246785.2-201ENST00000432512 513 ntBASIC16.44■□□□□ 0.22
RPH3AQ9Y2J0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms