Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 AL023973.1-201ENST00000624619 620 ntBASIC17.38■□□□□ 0.37
SNX6Q9UNH7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 LINC00167-201ENST00000530583 1419 ntBASIC17.38■□□□□ 0.37
SNX6Q9UNH7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX6Q9UNH7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.37■□□□□ 0.37
SNX6Q9UNH7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.37■□□□□ 0.37
SNX6Q9UNH7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 COX11P1-201ENST00000489116 835 ntBASIC17.37■□□□□ 0.37
SNX6Q9UNH7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 AC024563.2-201ENST00000603282 481 ntBASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 KRT89P-201ENST00000620027 1478 ntBASIC17.37■□□□□ 0.37
SNX6Q9UNH7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNX6Q9UNH7 LINC00602-201ENST00000629776 2065 ntBASIC17.36■□□□□ 0.37
SNX6Q9UNH7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 RASA4DP-201ENST00000460726 1199 ntBASIC17.36■□□□□ 0.37
SNX6Q9UNH7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX6Q9UNH7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms