Protein–RNA interactions for Protein: Q9UMZ3

PTPRQ, Phosphatidylinositol phosphatase PTPRQ, humanhuman

Predictions only

Length 2,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQQ9UMZ3 AC023141.13-201ENST00000604991 943 ntBASIC16.33■□□□□ 0.2
PTPRQQ9UMZ3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPRQQ9UMZ3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 MYLKP1-201ENST00000509077 1580 ntBASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 AC007064.4-201ENST00000637740 555 ntBASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 AC007952.6-201ENST00000573168 2673 ntBASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 AC003957.1-201ENST00000625108 2673 ntBASIC16.32■□□□□ 0.2
PTPRQQ9UMZ3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 KRT18P32-201ENST00000424695 1287 ntBASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 OR8S1-201ENST00000310194 1080 ntBASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AP001059.3-201ENST00000619053 235 ntBASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AC008761.3-201ENST00000624803 892 ntBASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.31■□□□□ 0.2
PTPRQQ9UMZ3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 SIRPAP1-201ENST00000448467 1770 ntBASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 AL020989.1-201ENST00000422979 469 ntBASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 AC132938.5-201ENST00000624980 1813 ntBASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPRQQ9UMZ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms