Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC28.2■■■□□ 2.1
RIMBP3Q9UFD9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIMBP3Q9UFD9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIMBP3Q9UFD9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC28.2■■■□□ 2.1
RIMBP3Q9UFD9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28.2■■■□□ 2.1
RIMBP3Q9UFD9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIMBP3Q9UFD9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 SPCS2P4-201ENST00000436160 681 ntBASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 AC022210.1-201ENST00000449856 793 ntBASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 API5-211ENST00000534695 560 ntTSL 5 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 MIR6787-201ENST00000616675 61 ntBASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
RIMBP3Q9UFD9 AL391422.3-201ENST00000603791 2761 ntBASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 WASH4P-201ENST00000564273 1246 ntBASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 IGHV3OR16-16-201ENST00000563644 343 ntBASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 RARRES2P8-201ENST00000566335 367 ntBASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.18■■■□□ 2.1
RIMBP3Q9UFD9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 FP475955.4-201ENST00000623131 1990 ntBASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 KRT17P8-201ENST00000540749 863 ntBASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 MIR4259-201ENST00000584466 101 ntBASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 AL590560.3-201ENST00000623350 461 ntBASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
RIMBP3Q9UFD9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 AL512384.1-201ENST00000406683 331 ntBASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 KRT8P44-201ENST00000441609 1350 ntBASIC28.16■■■□□ 2.1
RIMBP3Q9UFD9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC28.15■■■□□ 2.1
RIMBP3Q9UFD9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 AC092506.1-202ENST00000401022 528 ntBASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC28.14■■■□□ 2.1
RIMBP3Q9UFD9 RAB43P1-201ENST00000561790 589 ntBASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms