Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
COMMD3Q9UBI1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 AC093010.1-201ENST00000473625 1624 ntBASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COMMD3Q9UBI1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 FLJ38576-201ENST00000623820 2459 ntBASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 PNMA6B-201ENST00000538162 1200 ntBASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 HLA-B-256ENST00000639848 1089 ntBASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 AL391005.1-201ENST00000623953 2435 ntBASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 AL109659.2-201ENST00000606809 1674 ntBASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.79■□□□□ 0.12
COMMD3Q9UBI1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 AC091874.3-201ENST00000512672 1195 ntBASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD3Q9UBI1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms