Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 AF228730.7-201ENST00000641842 219 ntBASIC20.22■□□□□ 0.83
COL20A1Q9P218 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 AC012640.2-201ENST00000561606 901 ntBASIC20.21■□□□□ 0.83
COL20A1Q9P218 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL20A1Q9P218 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COL20A1Q9P218 AC009949.1-201ENST00000623048 1830 ntBASIC20.2■□□□□ 0.82
COL20A1Q9P218 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 AL020996.1-203ENST00000536896 2307 ntBASIC20.2■□□□□ 0.82
COL20A1Q9P218 AC004817.3-201ENST00000602957 2129 ntBASIC20.2■□□□□ 0.82
COL20A1Q9P218 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 AL139288.1-201ENST00000623748 933 ntBASIC20.2■□□□□ 0.82
COL20A1Q9P218 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.2■□□□□ 0.82
COL20A1Q9P218 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL20A1Q9P218 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COL20A1Q9P218 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 BX005266.1-201ENST00000473402 457 ntBASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC116407.3-201ENST00000623905 1129 ntBASIC20.19■□□□□ 0.82
COL20A1Q9P218 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC079776.2-201ENST00000641154 1609 ntBASIC20.19■□□□□ 0.82
COL20A1Q9P218 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL20A1Q9P218 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.19■□□□□ 0.82
COL20A1Q9P218 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL20A1Q9P218 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms