Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 AP005901.3-202ENST00000581653 237 ntBASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 AC005336.2-201ENST00000593183 939 ntBASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 AC116407.2-201ENST00000613639 860 ntBASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 AC093458.2-201ENST00000623150 629 ntBASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ECHDC1Q9NTX5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.83■■□□□ 1.08
ECHDC1Q9NTX5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 AC092119.3-201ENST00000612618 583 ntBASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ECHDC1Q9NTX5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 TOB2P1-201ENST00000469761 992 ntBASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 AC233702.3-201ENST00000578656 1387 ntBASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 AC067852.2-201ENST00000590513 2313 ntBASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.81■■□□□ 1.08
ECHDC1Q9NTX5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 AC134043.2-201ENST00000624206 2238 ntBASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ECHDC1Q9NTX5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms