Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.22■□□□□ 0.19
HINT3Q9NQE9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 AP001094.4-201ENST00000579008 2176 ntBASIC16.21■□□□□ 0.19
HINT3Q9NQE9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 ECEL1P2-202ENST00000465689 757 ntBASIC16.21■□□□□ 0.19
HINT3Q9NQE9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 MIR3180-4-201ENST00000582223 153 ntBASIC16.21■□□□□ 0.19
HINT3Q9NQE9 AC112497.1-201ENST00000624824 639 ntBASIC16.21■□□□□ 0.19
HINT3Q9NQE9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 AC022211.2-201ENST00000585075 2527 ntBASIC16.21■□□□□ 0.19
HINT3Q9NQE9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 AD000864.1-201ENST00000624076 2295 ntBASIC16.21■□□□□ 0.19
HINT3Q9NQE9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
HINT3Q9NQE9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HINT3Q9NQE9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.21■□□□□ 0.18
HINT3Q9NQE9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HINT3Q9NQE9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
HINT3Q9NQE9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HINT3Q9NQE9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HINT3Q9NQE9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 LINC00602-201ENST00000629776 2065 ntBASIC16.2■□□□□ 0.18
HINT3Q9NQE9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 SLC25A3P1-201ENST00000443844 931 ntBASIC16.2■□□□□ 0.18
HINT3Q9NQE9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 AC133963.1-201ENST00000504166 1679 ntBASIC16.2■□□□□ 0.18
HINT3Q9NQE9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HINT3Q9NQE9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HINT3Q9NQE9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms