Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 BX276092.5-203ENST00000456199 560 ntBASIC15.34■□□□□ 0.05
GCM1Q9NP62 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 KRT8P26-201ENST00000534154 1276 ntBASIC15.34■□□□□ 0.05
GCM1Q9NP62 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 AL121672.3-201ENST00000608644 468 ntBASIC15.34■□□□□ 0.05
GCM1Q9NP62 AC004263.2-201ENST00000617183 678 ntBASIC15.34■□□□□ 0.05
GCM1Q9NP62 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 AL353692.3-201ENST00000407031 1396 ntBASIC15.34■□□□□ 0.05
GCM1Q9NP62 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.34■□□□□ 0.05
GCM1Q9NP62 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GCM1Q9NP62 AC093677.2-201ENST00000600169 1863 ntBASIC15.33■□□□□ 0.05
GCM1Q9NP62 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GCM1Q9NP62 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 UPK3BP1-201ENST00000428678 509 ntBASIC15.33■□□□□ 0.04
GCM1Q9NP62 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 AC069148.1-201ENST00000608741 768 ntBASIC15.33■□□□□ 0.04
GCM1Q9NP62 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
GCM1Q9NP62 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GCM1Q9NP62 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.32■□□□□ 0.04
GCM1Q9NP62 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.32■□□□□ 0.04
GCM1Q9NP62 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 LINC00602-201ENST00000629776 2065 ntBASIC15.32■□□□□ 0.04
GCM1Q9NP62 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GCM1Q9NP62 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GCM1Q9NP62 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GCM1Q9NP62 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms