Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 AL645608.8-201ENST00000606034 2086 ntBASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 AL355312.1-201ENST00000407115 2176 ntBASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRTM1Q9HBL6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 PP12613-201ENST00000424958 2230 ntBASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LRTM1Q9HBL6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 LINC00602-201ENST00000629776 2065 ntBASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LRTM1Q9HBL6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 KRT18P22-201ENST00000402024 1347 ntBASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 AC141257.4-201ENST00000634557 245 ntBASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 AC136944.6-201ENST00000634818 245 ntBASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRTM1Q9HBL6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms