Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 AL032819.2-201ENST00000624543 2162 ntBASIC19.56■□□□□ 0.72
C11orf49Q9H6J7 AC132938.6-201ENST00000623828 1655 ntBASIC19.56■□□□□ 0.72
C11orf49Q9H6J7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AL121761.2-201ENST00000598007 1648 ntBASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 INGX-202ENST00000489074 768 ntBASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AC067863.1-201ENST00000494933 530 ntBASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 OR7E47P-204ENST00000575924 449 ntBASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 GGTLC5P-201ENST00000617623 998 ntBASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C11orf49Q9H6J7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 KLF4P1-201ENST00000412782 1185 ntBASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 DDX43P3-201ENST00000441064 443 ntBASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 DUX4L27-201ENST00000554796 1261 ntBASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 AC068137.2-201ENST00000605408 478 ntBASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
C11orf49Q9H6J7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 AL499627.1-201ENST00000569373 2188 ntBASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 PTCHD3P3-201ENST00000403073 906 ntBASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 AC005225.4-201ENST00000557330 545 ntBASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 AC087641.1-201ENST00000557561 1021 ntBASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 AC015911.4-201ENST00000588022 1070 ntBASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C11orf49Q9H6J7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C11orf49Q9H6J7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms