Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.33■□□□□ 0.68
NXF3Q9H4D5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 AL022342.1-201ENST00000400363 863 ntBASIC19.32■□□□□ 0.68
NXF3Q9H4D5 AL031284.1-201ENST00000419297 478 ntBASIC19.32■□□□□ 0.68
NXF3Q9H4D5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 SART3-203ENST00000546611 1184 ntBASIC19.32■□□□□ 0.68
NXF3Q9H4D5 AP001005.1-201ENST00000571755 1248 ntBASIC19.32■□□□□ 0.68
NXF3Q9H4D5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NXF3Q9H4D5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 RNPS1P1-201ENST00000507437 918 ntBASIC19.31■□□□□ 0.68
NXF3Q9H4D5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NXF3Q9H4D5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 AC073648.2-201ENST00000510116 352 ntBASIC19.3■□□□□ 0.68
NXF3Q9H4D5 AL049840.3-201ENST00000602669 611 ntBASIC19.3■□□□□ 0.68
NXF3Q9H4D5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 AC120114.3-201ENST00000611923 658 ntBASIC19.3■□□□□ 0.68
NXF3Q9H4D5 MIR7706-201ENST00000613747 67 ntBASIC19.3■□□□□ 0.68
NXF3Q9H4D5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NXF3Q9H4D5 AP000997.3-201ENST00000623333 2250 ntBASIC19.3■□□□□ 0.68
NXF3Q9H4D5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 HNRNPDP1-201ENST00000439535 754 ntBASIC19.29■□□□□ 0.68
NXF3Q9H4D5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 SCARNA2-201ENST00000458748 420 ntBASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 AC021087.4-201ENST00000563761 564 ntBASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms