Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR2J3Q9H1A7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 AC106820.2-201ENST00000563775 3264 ntBASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 AP000523.1-201ENST00000398242 1049 ntBASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 SEC1P-202ENST00000473944 940 ntBASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 PCDHA12-202ENST00000613593 2588 ntBASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
POLR2J3Q9H1A7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 AC092865.7-201ENST00000641832 219 ntBASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 AC080080.1-201ENST00000625121 2420 ntBASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
POLR2J3Q9H1A7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
POLR2J3Q9H1A7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
POLR2J3Q9H1A7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms