Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 LINC01126-201ENST00000623515 1646 ntBASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 MYLKP1-201ENST00000509077 1580 ntBASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 AC006504.4-201ENST00000592118 1568 ntBASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 AC138761.1-201ENST00000584393 385 ntBASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 AC093512.1-201ENST00000617969 520 ntBASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCL11BQ9C0K0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 ELK2BP-201ENST00000415014 1224 ntBASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 IGHV3-65-201ENST00000523210 341 ntBASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
BCL11BQ9C0K0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 PDPK2P-202ENST00000562415 1191 ntBASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 AC087289.5-201ENST00000586076 3175 ntBASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.17■■□□□ 1.3
BCL11BQ9C0K0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 KRT8P47-201ENST00000604727 1398 ntBASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AC122714.2-201ENST00000502787 707 ntBASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AC008667.4-201ENST00000607370 168 ntBASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AC138932.1-201ENST00000534164 6830 ntBASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BCL11BQ9C0K0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms