Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 DUTP2-201ENST00000519164 463 ntBASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 IGHV3-65-201ENST00000523210 341 ntBASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 RFPL4AP1-201ENST00000530883 850 ntBASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RTFDC1Q9BY42 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AC093010.1-201ENST00000473625 1624 ntBASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AL049757.1-201ENST00000616842 1596 ntBASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AC108073.2-201ENST00000464002 357 ntBASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AC008667.4-201ENST00000607370 168 ntBASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 AC132938.5-201ENST00000624980 1813 ntBASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTFDC1Q9BY42 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 MKNK2P1-201ENST00000437526 628 ntBASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 CYMP-203ENST00000474680 1263 ntBASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.65■■□□□ 1.06
RTFDC1Q9BY42 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTFDC1Q9BY42 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTFDC1Q9BY42 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTFDC1Q9BY42 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTFDC1Q9BY42 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTFDC1Q9BY42 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.64■■□□□ 1.06
RTFDC1Q9BY42 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RTFDC1Q9BY42 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 AC148477.5-201ENST00000625164 1645 ntBASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 HTR5BP-201ENST00000430851 1154 ntBASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 SNHG9-202ENST00000564014 471 ntBASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 AL513190.1-201ENST00000621254 727 ntBASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms